Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948029.1_cds_XP_016489429.1_79953
CDS Infomation

[gene=LOC107809339] [db_xref=GeneID:107809339] [protein=two-component response regulator ORR24-like] [protein_id=XP_016489429.1] [location=complement(join(87106..87180,87899..89161,89492..89568,89665..90057,90387..90539,91321..91444))] [gbkey=CDS]
Sequence

ATGACTGTGGAGGAAAGGGAGAATTTTGATAATTTTCCTATTGGTATGAGAGTTCTCGCT
GTTGATGATGACCCAATTTGTTTGAAGTTATTGGATGGATTGCTTAGGAAATGCCAATAT
CAGGTAACTACGACAAGTCAGGCAAGAACAGCATTGAAGATGTTAAGGGAAAATCGAGAT
AGATTTGACCTGGTAATCAGTGATGTCCACATGCCTGATATGGATGGCTTTAAACTTCTG
GAGCTTGTCGGTCTTGAGATGGATCTTCCCGTCATAATGTTGTCAGCAAACAGTGATAGC
AGACTTGTAATGAAAGGAATAACTCATGGTGCTTGTGACTATTTGGTGAAACCTGTCCGG
CTTGAGGAGCTGAAGAATATATGGCAACATGTAATAAGGAAAAAGAAAGTTGAACCTAAG
AACCACATCAAGTCTGATGATCAAGACAAGGCAAATCAGGGAGGTGGAGAAGGTGGCAAA
GGACGACAGCTTTCAGGTAACGCAGATCAAAACGGGAAGCTTAACAAGAAAAGGAAAGAT
GAAGAATATGAAAGCGATGAAAATGGAAATGACGATGACGATCCAACAACTCAGAAGAAA
CCTCGTGTTGTTTGGTCTATAGAGCTTCATAGGAAGTTTGTTGCAGCTGTTAATCAGCTA
GGCCTTGAAAAAGCTGTTCCTAAGAGGATTCTCGACATGATGAATGTTGATGGACTTACA
AGAGAGAATGTGGCTAGCCATCTTCAGAAGTATAGGCTCTACTTGAAAAGGATCAGCTCA
GAAGCAACCCAGCAAGCCAACATGGTTGCCGCATTAGGTGGAAAAGATTCTGCGTACATG
CGAATGGGTTCACTTGACGGGCTTGGTGGTTTTCGAACATTGGCTGGATCCGGAAGGTAT
GGTCAGGCCAGCTTATCATCATCATATGCATCAGGAGGTATGCTCGGCAGGCTAAATAGT
CCTGCCGGTGTAAGCCTTCGCAGTCTGGCATCATCGCCGCTGCTCCAACCTAATCATGGT
CAAAGTTTAAGCAACTCCATGAATTCTTTTACGAAGTTGAATCCAAATGTTCCACCTGTA
AGCCAGAATGCTAGTTTATTCCATGGAATTCCTGCATCGTTGGAGCTTGATCAATTGCAG
CAGAGTAAGCGTGCCATACACATGGGAGAACTGAATCCTTTGGATGAGCACGGACTGCTC
ACAGCGGCCAGTAGTACATTCATGGACTCTAGATCTGTGGTTGGTAACTCAAACAGCTCG
TTGTCCAATGTCTTAAATAATCCTATATTGCTTCAAGTGAGCTCCCAGCAACCACGGACA
GGGGGAGGATTTGGAAATCAACCTTCTCTCAACGTCGCTTCTTTTAGCTCTGACGCCTTT
AATACTGGAGTAAGTGGTTCTTCCAATTTTCTGGACCATAGTAGATATAATGAGAATTGC
CAAAACTCTATCCAGCCTGTGAAGTTCCAGTCAAGTTCTTTTCCTTCGACTGAACCTTTT
AGTAACAGCCATTTGCCTCAAGATAGGGTAAGAGAGAATAGCACTTCAGCTGGCCCTCAT
TTGCAGAACAGCACCGTTGATTTTTCTTCCTCGACCATAGTATCCCTACCTTTTGAACCT
TCAAGAGGAGAAACACAATGCCTGGAAAGTTTAGGGGGTGGTGTTCAGATTATGAACCAA
GCACACTGCCAACCGTGGCCGGATCAGAACCAACATTATTCCCAGAACTCAAACCATATT
TTTGGCAACATGAGCTCTCAACTTTCCAGCAATGGTGGTGTGGCGTCTTTACCCCAGAGC
ATGGACCAAAACAATGAAGTGGTCTACAGAGGGGTGGACGTCTCTTTGATTGGCAGATCA
AATGGAGGTTCTTCAGCACTCATACAACATAGACCCAACTCGAGGACGAGGACAAGTGAA
GACTATCTCTTCGAGACAACAAAGCAACAAGTTGGTTTTCTTCCTCAGGGCTATGGCTCC
CTTGATGATCTAATGAGTGCAATGAAACCGGAGCAACAAGATGGAGCCATGTTAGAAGGG
GGAGAATTTGGATTTGATGCTTATTCTTTTGGGTCAGGTTTATGA

Peptide Sequence

PEP ID

XP_016489429.1
PEP Infomation

PREDICTED: two-component response regulator ORR24-like [Nicotiana tabacum]
Sequence

MTVEERENFDNFPIGMRVLAVDDDPICLKLLDGLLRKCQYQVTTTSQARTALKMLRENRD
RFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANSDSRLVMKGITHGACDYLVKPVR
LEELKNIWQHVIRKKKVEPKNHIKSDDQDKANQGGGEGGKGRQLSGNADQNGKLNKKRKD
EEYESDENGNDDDDPTTQKKPRVVWSIELHRKFVAAVNQLGLEKAVPKRILDMMNVDGLT
RENVASHLQKYRLYLKRISSEATQQANMVAALGGKDSAYMRMGSLDGLGGFRTLAGSGRY
GQASLSSSYASGGMLGRLNSPAGVSLRSLASSPLLQPNHGQSLSNSMNSFTKLNPNVPPV
SQNASLFHGIPASLELDQLQQSKRAIHMGELNPLDEHGLLTAASSTFMDSRSVVGNSNSS
LSNVLNNPILLQVSSQQPRTGGGFGNQPSLNVASFSSDAFNTGVSGSSNFLDHSRYNENC
QNSIQPVKFQSSSFPSTEPFSNSHLPQDRVRENSTSAGPHLQNSTVDFSSSTIVSLPFEP
SRGETQCLESLGGGVQIMNQAHCQPWPDQNQHYSQNSNHIFGNMSSQLSSNGGVASLPQS
MDQNNEVVYRGVDVSLIGRSNGGSSALIQHRPNSRTRTSEDYLFETTKQQVGFLPQGYGS
LDDLMSAMKPEQQDGAMLEGGEFGFDAYSFGSGL

Transcript Sequence

Gene sequence data has not been registered.